Navigation
index
next
|
CellOrganizer v2.7.1
»
Next topic
Introduction
This Page
Show Source
Quick search
CellOrganizer Documentation
ΒΆ
Contents:
Introduction
Disclaimer
About this document
Installation
Installing CellOrganizer
Installing CellOrganizer on a HPC
Installing CellOrganizer for Docker
Running CellOrganizer for Docker
Access cellorganizer-docker container interactively
Run a demo that invokes img2slml
Run a demo that invokes slml2img
Exit the container
Export generated data out of the container
Tutorial: CellOrganizer in 45 Minutes
Introduction
Whom is this tutorial for?
Resources
Prerequisites
Requirements for inputs for building models
Setup
Training Models
Synthesizing an Image from a Model
Visualizing Model Results
Demos
2D/3D Demos
Demos Summary Table
Brief Descriptions
Additional Information
Model classes and types
Reproducing Figures from Research Articles
OME-TIFF
SBML Spatial Level 3
T cell models
Main Functions
img2slml
slml2info
slml2img
slml2report
Navigation
index
next
|
CellOrganizer v2.7.1
»