Reproducing Figures from Research ArticlesΒΆ

This table is a guide to specific demos included with CellOrganizer that generate figures similar to those presented in publications that used CellOrganizer to analyze particular datasets. Some demos will generate the same figures as in the research article and others will build a similar output, e.g. same figure different synthetic image.

Article Figure 1 Figure 2 Figure 3 Figure 4 Figure 5 Figure 6 Figure 7 Figure 8 Figure 9 Figure 10
Johnson et a. (2105) N/A demo3D27 N/A N/A N/A N/A N/A N/A N/A N/A
Li et al. (2012) N/A demo3D00, demo3D02 N/A demo3D04 demo3D35 N/A N/A N/A N/A N/A
Buck et al. (2012) demo2D01 demo3D11 N/A demo2D02, demo3D09 N/A demo3D04 N/A N/A N/A N/A
Murphy (2012) demo2D01 demo3D11 N/A N/A N/A N/A N/A N/A N/A N/A
Peng and Murphy (2011) demo3D11 N/A N/A N/A N/A N/A N/A demo3D02 N/A N/A
Shariff et al (2011) demo3D04 demo3D04 N/A N/A N/A N/A N/A N/A N/A N/A
Murphy (2010) N/A N/A N/A demo3D01 N/A demo2D00 N/A N/A N/A N/A
Shariff et al. (2010) demo3D01, demo3D14 N/A N/A demo3D07, demo3D06 N/A demo3D35 demo3D35 demo3D35 N/A N/A
Peng et al. (2009) N/A demo2D04, demo3D15, demo3D20 N/A N/A demo3D15 N/A N/A N/A N/A N/A