Software download
targetpw.zip: Matlab implementation of our model.
- Code for simulation study is included.
- Also include supporting python scripts for conversion of Yeast GFP, UniProt, BioGRID and disc HMM
data files.
- System requirements: Matlab 7.0 or above with statistics toolbox, and Python 2.6+.
Required open source libraries (Lightspeed, Hungarian and SVM-multi-class)
and usage of our model are documented in README in the package.
dischmm.zip: discriminative HMM motif finder v2.0.
targetpw_data.zip: raw data user in the
manuscript (15MB).
- This zip file contains all data used for the studies described in this
manuscript. The original sources and versions listed below.
Data sources